Overview

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TACCO is a cancer transcriptome database which allows users to:

• 1.) Browse the expression level of a specific gene/miRNA across different cancer types.
• 2.) Explore the correlations between the expression between miRNAs and their target genes.
• 3.) Search Gene Set Enrichment Analysis results to investigate transcriptome alterations in different cancer types.
• 4.) Identify differentially expressed genes (DEGs).
• 5.) Identify differentially expressed miRNAs (DEmiRNAs).
• 6.) Perform KEGG pathway enrichment analysis for a gene list of interest*.
• 7.) Carry out GO enrichment analysis for a gene list of interest*.
• 8.) Construct a survival prediction model from a gene list of interest* in different cancer types.
• 9.) Construct a pathological classification model from a gene list of interest* in different cancer types.

*A gene list of interest can be (1) DEGs (2) target genes of DEmiRNAs (3) an uploaded gene list or (4) target genes of uploaded DEmiRNAs.